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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12047440_12047547_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
12047440 - 12047547

Intron Length:
108

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACCCCCA

5'SS Class:
major

3'SS Sequence:
CCCCCCCCTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCTCAC

U12 Branch Point Sequence:
TCACCCTGCTCT

Flanking Amino Acid:
GFRRVPLHLQVPYMPSSAQQ

Intron Amino Acid Position:
55

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
64.3
0.34
1.3
53.6
45.3

Major BPS
60.1
0.25
1.1
62.9
34.3

Major PPT
71.4
0.48
0.8
61.2
29.2

Minor 5ss
42.6
-0.8
3.1
57.9
46.3

Minor BPS
37.1
-0.9
3.5
63.25
46.3

Associated Gene:

Gene:
ANTKMT

Ensembl Gene ID:

Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

12047278 - 12049347
2070