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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12057905_12061117_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12057905 - 12061117

Intron Length:

3213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGACAG

5'SS Class:

strong_major

3'SS Sequence:

CTTGACCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAGAT

U12 Branch Point Sequence:

TCTTGCTTGACC

Flanking Amino Acid:

LALGKELDQEVLKNEELSLE

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

67.7

39.3

Major BPS

74.1

0.6

38.9

Major PPT

67.4

0.39

39.6

Minor 5ss

25.9

-2.8

2.9

29.3

43.4

Minor BPS

68.6

0.57

1.8

77.58

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004763

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004922

12049002 - 12062753

13752