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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12071883_12072192_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12071883 - 12072192

Intron Length:

310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTCAC

U12 Branch Point Sequence:

TTCTCTCCCACA

Flanking Amino Acid:

LAKYAGVPFLGSVPLDPQLS

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

66.6

39.6

Major BPS

54.8

0.12

1.2

58.7

38.1

Major PPT

81.5

0.71

0.7

76.3

25.9

Minor 5ss

27.1

-2.6

26.2

36.9

Minor BPS

45.6

-0.3

2.2

63.87

42.8

Associated Gene:

Gene:

NUBP2

Ensembl Gene ID:

ENSAPLG00000004901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005053

12071737 - 12076231

4495