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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12072263_12072813_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12072263 - 12072813

Intron Length:

551

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGTGCAGC

5'SS Class:

weak_major

3'SS Sequence:

TCTCCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCATGAC

U12 Branch Point Sequence:

GGGTGCATGACT

Flanking Amino Acid:

QLAGALGTAPECTNVFSKGG

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.4

0.13

1.1

49.1

41.5

Major BPS

47.8

-0.1

1.3

39.4

40.4

Major PPT

82.8

0.74

0.7

77.1

24.8

Minor 5ss

43.3

-0.7

2.8

43.8

Minor BPS

47.6

-0.1

2.1

65.8

44.5

Associated Gene:

Gene:

NUBP2

Ensembl Gene ID:

ENSAPLG00000004901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005053

12071737 - 12076231

4495