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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12072824_12072877_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12072824 - 12072877

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGG|GCAAGGCCG

5'SS Class:

major

3'SS Sequence:

ACCCATCCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

TGCACCCCAAAT

Flanking Amino Acid:

PQVGQLAGALGTAPECTNVF

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.2

64.5

41.4

Major BPS

61.3

0.28

30.6

Major PPT

68.9

0.43

0.9

58.2

37.5

Minor 5ss

20.3

-3.4

3.8

22.7

36.8

Minor BPS

45.9

-0.2

64.46

44.8

Associated Gene:

Gene:

NUBP2

Ensembl Gene ID:

ENSAPLG00000004901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005053

12071737 - 12076231

4495