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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12073393_12074033_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12073393 - 12074033

Intron Length:

641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

TCGTCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAG

U12 Branch Point Sequence:

CCTGTCTGCAGG

Flanking Amino Acid:

ALALRQAGRKVGILDVDLCG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.4

38.7

Major BPS

45.4

-0.2

1.8

59.3

47.1

Major PPT

74.9

0.56

0.8

69.4

31.2

Minor 5ss

30.2

-2.3

3.3

36.8

47.7

Minor BPS

38.1

-1

2.1

38.41

45.2

Associated Gene:

Gene:

NUBP2

Ensembl Gene ID:

ENSAPLG00000004901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005053

12071737 - 12076231

4495