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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12079932_12080098_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12079932 - 12080098

Intron Length:

167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CTGTCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

CTAACGTGAAGC

Flanking Amino Acid:

LTFFKNRKCIGVAATKLQNK

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

77.8

Major BPS

0.45

0.9

67.6

25.3

Major PPT

76.7

0.6

0.8

30.9

Minor 5ss

30.7

-2.2

3.3

39.5

45.9

Minor BPS

42.1

-0.6

2.3

52.68

44.4

Associated Gene:

Gene:

SPSB3

Ensembl Gene ID:

ENSAPLG00000005074

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034995

12074864 - 12081136

6273

ENSAPLT00000005240

12075347 - 12081136

5790