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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12191896_12197936_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12191896 - 12197936

Intron Length:

6041

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

TCTGCCTCACCC

Flanking Amino Acid:

ASAREANECLACNCNLHARR

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

75.8

34.3

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

82.9

0.74

0.7

76.7

25.3

Minor 5ss

32.5

-2

3.1

35.2

41.4

Minor BPS

51.8

0.04

66.23

45.6

Associated Gene:

Gene:

NTN3

Ensembl Gene ID:

ENSAPLG00000020398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034154

12178538 - 12199158

20621

ENSAPLT00000027847

12178538 - 12199158

20621