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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12263385_12263659_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

12263385 - 12263659

Intron Length:

275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

TCCCCGTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

GTCCCCTGACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

69.9

0.45

36.7

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

53.1

0.18

1.8

71.32

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007522

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007800

12258042 - 12266871

8830