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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12276_15180_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12276 - 15180

Intron Length:

2905

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAACCTTA

5'SS Class:

weak_major

3'SS Sequence:

TCTGTGCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

GTTATATTATAT

Flanking Amino Acid:

KILGEGSFSTVVLARELASS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.2

66.3

42.1

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

68.3

0.41

62.4

38.7

Minor 5ss

62.1

0.41

2.4

73.7

42.8

Minor BPS

46.9

-0.1

1.9

42.1

Associated Gene:

Gene:

PDPK1

Ensembl Gene ID:

ENSAPLG00000015673

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048498

890 - 25429

24540

ENSAPLT00000016388

890 - 25912

25023