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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12390166_12411306_R

Intron Information:

Intron Rank:

136719

Intron Class:

major

Intron Phase:

Intron Coordinates:

12390166 - 12411306

Intron Length:

21141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGCTG

5'SS Class:

major

3'SS Sequence:

TTCTCCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACGCAC

U12 Branch Point Sequence:

CCTGCTGCAACG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

64.3

47.1

Major BPS

47.4

-0.1

1.2

55.1

32.8

Major PPT

83.3

0.75

0.7

77.6

24.3

Minor 5ss

39.9

-1.1

3.4

55.8

48.4

Minor BPS

-0.7

2.2

46.32

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046121

12389184 - 12411479

22296