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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12390166_12436918_R

Intron Information:

Intron Rank:

136714

Intron Class:

major

Intron Phase:

Intron Coordinates:

12390166 - 12436918

Intron Length:

46753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACGCAC

U12 Branch Point Sequence:

CCTGCTGCAACG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

68.7

34.5

Major BPS

47.4

-0.1

1.2

55.1

32.8

Major PPT

83.3

0.75

0.7

77.6

24.3

Minor 5ss

31.8

-2.1

3.3

40.1

39.9

Minor BPS

-0.7

2.2

46.32

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022509

12389184 - 12446905

57722

ENSAPLT00000019579

12389184 - 12456779

67596