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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12528936_12529275_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12528936 - 12529275

Intron Length:

340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TGGTGTCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAT

U12 Branch Point Sequence:

TAATGCTCAGAC

Flanking Amino Acid:

IYVNPEDLTQVTLAGYCFAF

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

69.5

41.1

Major BPS

64.3

0.36

1.2

65.3

38.6

Major PPT

72.2

0.5

0.9

66.2

40.8

Minor 5ss

38.7

-1.3

3.1

51.6

45.2

Minor BPS

43.1

-0.5

2.1

54.55

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008922

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045152

12526551 - 12571988

45438

ENSAPLT00000041300

12525531 - 12571761

46231

ENSAPLT00000009290

12526551 - 12535419

8869