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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12541923_12545005_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

12541923 - 12545005

Intron Length:

3083

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CCGTGCTCACTG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

78.3

32.5

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

81.4

0.71

0.7

80.1

25.3

Minor 5ss

35.1

-1.7

2.8

43.9

Minor BPS

39.6

-0.9

2.1

38.28

45.5

Associated Gene:

Gene:

ABCA3

Ensembl Gene ID:

ENSAPLG00000002878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025452

12540852 - 12567629

26778