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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12545099_12546964_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12545099 - 12546964

Intron Length:

1866

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCACA

5'SS Class:

strong_major

3'SS Sequence:

GGCCTCTCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTGT

U12 Branch Point Sequence:

TTTTTGTTCTCC

Flanking Amino Acid:

LLLWKNYILQKRQILVTVIE

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

71.6

40.2

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

68.1

0.41

0.9

61.2

Minor 5ss

38.3

-1.3

3.1

49.3

46.7

Minor BPS

38.5

-0.8

3.8

69.18

42.9

Associated Gene:

Gene:

ABCA3

Ensembl Gene ID:

ENSAPLG00000002878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003006

12539476 - 12564912

25437

ENSAPLT00000025452

12540852 - 12567629

26778