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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12547230_12547849_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12547230 - 12547849

Intron Length:

620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

GTACCGGCAGCT

Flanking Amino Acid:

VERALPISIRAQGFASEREF

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

0.28

1.1

63.1

35.8

Major PPT

82.9

0.74

0.7

77.4

24.6

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

35.2

-1

2.6

55.66

45.7

Associated Gene:

Gene:

ABCA3

Ensembl Gene ID:

ENSAPLG00000002878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025452

12540852 - 12567629

26778

ENSAPLT00000003006

12539476 - 12564912

25437