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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12547978_12548102_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12547978 - 12548102

Intron Length:

125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GTCCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCGCGAC

U12 Branch Point Sequence:

TGGTGCGCGACG

Flanking Amino Acid:

NHSTAPLPLQVDYELRFKYS

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.7

26.7

Major BPS

37.5

-0.7

1.3

23.5

34.1

Major PPT

0.5

0.8

65.6

30.3

Minor 5ss

29.9

-2.3

3.2

41.3

45.2

Minor BPS

39.4

-0.9

2.5

47.21

Associated Gene:

Gene:

ABCA3

Ensembl Gene ID:

ENSAPLG00000002878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025452

12540852 - 12567629

26778

ENSAPLT00000003006

12539476 - 12564912

25437