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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12548269_12549420_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12548269 - 12549420

Intron Length:

1152

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

TGTTGCCGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTTAT

U12 Branch Point Sequence:

CCTGCTTTATGG

Flanking Amino Acid:

EAKFADGGTPGYIREGFLAV

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

72.1

39.1

Major BPS

66.1

0.4

1.3

59.6

46.8

Major PPT

72.5

0.51

40.8

Minor 5ss

27.9

-2.5

3.2

39.3

46.1

Minor BPS

44.3

-0.5

45.73

47.5

Associated Gene:

Gene:

ABCA3

Ensembl Gene ID:

ENSAPLG00000002878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025452

12540852 - 12567629

26778

ENSAPLT00000003006

12539476 - 12564912

25437