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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12550644_12551222_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12550644 - 12551222

Intron Length:

579

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTTGGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTGAC

U12 Branch Point Sequence:

CACGCCTGACCC

Flanking Amino Acid:

FFVTVLFCVKVSEQGAVLTN

Intron Amino Acid Position:

478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

75.7

34.4

Major BPS

51.1

0.03

1.2

39.9

Major PPT

82.7

0.74

80.6

Minor 5ss

27.6

-2.6

34.8

41.6

Minor BPS

46.2

-0.3

1.9

51.81

45.3

Associated Gene:

Gene:

ABCA3

Ensembl Gene ID:

ENSAPLG00000002878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025452

12540852 - 12567629

26778

ENSAPLT00000003006

12539476 - 12564912

25437