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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12551344_12551791_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12551344 - 12551791

Intron Length:

448

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTGCTCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTGAT

U12 Branch Point Sequence:

TTTTCCCTCCCT

Flanking Amino Acid:

NFMVSTFFSRANVAAAAGGF

Intron Amino Acid Position:

518

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.7

26.6

Major BPS

63.5

0.33

1.4

57.1

49.4

Major PPT

75.1

0.57

0.9

68.9

37.1

Minor 5ss

-1.6

2.8

44.6

43.4

Minor BPS

43.5

-0.4

3.8

84.58

42.1

Associated Gene:

Gene:

ABCA3

Ensembl Gene ID:

ENSAPLG00000002878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025452

12540852 - 12567629

26778

ENSAPLT00000003006

12539476 - 12564912

25437