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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12551966_12552644_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12551966 - 12552644

Intron Length:

679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGCG

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAC

U12 Branch Point Sequence:

CCCTGTGTCACT

Flanking Amino Acid:

AQLIGMFEGKGTGIQWRDLM

Intron Amino Acid Position:

576

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.8

40.2

Major BPS

57.2

0.18

1.4

63.1

44.5

Major PPT

74.4

0.55

0.9

67.2

39.1

Minor 5ss

31.2

-2.1

3.2

38.5

46.7

Minor BPS

38.8

-0.8

2.5

53.9

48.4

Associated Gene:

Gene:

ABCA3

Ensembl Gene ID:

ENSAPLG00000002878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003006

12539476 - 12564912

25437

ENSAPLT00000025452

12540852 - 12567629

26778