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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12552827_12553745_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12552827 - 12553745

Intron Length:

919

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCACT

5'SS Class:

major

3'SS Sequence:

CTTCTCCTGTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

GGGCTGATGAGT

Flanking Amino Acid:

VPQPWYFFLTPSYWCGRPRT

Intron Amino Acid Position:

637

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

71.8

39.7

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

77.4

0.62

0.9

31.7

Minor 5ss

37.1

-1.5

45.2

Minor BPS

35.1

-1

2.2

46.31

39.3

Associated Gene:

Gene:

ABCA3

Ensembl Gene ID:

ENSAPLG00000002878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025452

12540852 - 12567629

26778

ENSAPLT00000003006

12539476 - 12564912

25437