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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12553893_12554414_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12553893 - 12554414

Intron Length:

522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGCCT

5'SS Class:

major

3'SS Sequence:

GTGATCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACGTGAT

U12 Branch Point Sequence:

AGCTCAGTAACG

Flanking Amino Acid:

SGIKIKHLSKVFRVGNKVKE

Intron Amino Acid Position:

686

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.1

44.4

Major BPS

59.9

0.25

1.2

51.1

44.3

Major PPT

70.6

0.46

62.8

39.5

Minor 5ss

32.4

-2

3.5

46.7

Minor BPS

-0.3

2.3

55.73

45.1

Associated Gene:

Gene:

ABCA3

Ensembl Gene ID:

ENSAPLG00000002878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025452

12540852 - 12567629

26778

ENSAPLT00000003006

12539476 - 12564912

25437