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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12554545_12555046_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12554545 - 12555046

Intron Length:

502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGGCT

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCAGCAC

U12 Branch Point Sequence:

GCAGGCTCAGCA

Flanking Amino Acid:

GKTTTLSMLTGLYSPTSGQA

Intron Amino Acid Position:

729

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

73.2

34.8

Major BPS

46.4

-0.2

1.4

53.6

41.6

Major PPT

74.8

0.56

0.8

31.5

Minor 5ss

30.5

-2.2

3.8

47.1

48.5

Minor BPS

39.9

-0.7

2.1

45.02

43.6

Associated Gene:

Gene:

ABCA3

Ensembl Gene ID:

ENSAPLG00000002878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025452

12540852 - 12567629

26778

ENSAPLT00000003006

12539476 - 12564912

25437