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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12555568_12555884_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12555568 - 12555884

Intron Length:

317

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGCATC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCATGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

CCCATTTTGACC

Flanking Amino Acid:

IGIALIGDSKVVMLDEPTSG

Intron Amino Acid Position:

833

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.5

1.03

0.9

89.2

28.7

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

65.4

0.35

0.9

57.1

37.6

Minor 5ss

33.6

-1.9

51.2

45.7

Minor BPS

-0

1.3

52.73

39.8

Associated Gene:

Gene:

ABCA3

Ensembl Gene ID:

ENSAPLG00000002878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003006

12539476 - 12564912

25437

ENSAPLT00000025452

12540852 - 12567629

26778