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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12556096_12556387_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12556096 - 12556387

Intron Length:

292

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAA

U12 Branch Point Sequence:

CAGGTCTTACCC

Flanking Amino Acid:

GSSLFLKRKYGAGYHMVMVK

Intron Amino Acid Position:

903

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

71.3

40.1

Major BPS

0.3

34.1

Major PPT

79.8

0.67

0.7

32.6

Minor 5ss

31.8

-2.1

3.1

36.5

41.9

Minor BPS

48.7

-0.1

1.8

54.16

44.2

Associated Gene:

Gene:

ABCA3

Ensembl Gene ID:

ENSAPLG00000002878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025452

12540852 - 12567629

26778

ENSAPLT00000003006

12539476 - 12564912

25437