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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12559782_12560020_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12559782 - 12560020

Intron Length:

239

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTACGTCCG

5'SS Class:

major

3'SS Sequence:

TGCTCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAC

U12 Branch Point Sequence:

CTGTCCTAACCA

Flanking Amino Acid:

ITEKAKDQLMEGQTGFAIAI

Intron Amino Acid Position:

1243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.3

0.31

1.2

51.1

45.7

Major BPS

0.55

71.8

31.4

Major PPT

0.56

0.8

69.4

31.3

Minor 5ss

34.7

-1.7

38.6

40.2

Minor BPS

53.6

0.11

66.48

46.2

Associated Gene:

Gene:

ABCA3

Ensembl Gene ID:

ENSAPLG00000002878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025452

12540852 - 12567629

26778

ENSAPLT00000003006

12539476 - 12564912

25437