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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12560226_12560653_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12560226 - 12560653

Intron Length:

428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTCGC

5'SS Class:

major

3'SS Sequence:

TGCTGTGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CTCTCCTCACCT

Flanking Amino Acid:

NFLIPCALMLVIFQAFDVQA

Intron Amino Acid Position:

1312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.1

59.8

45.2

Major BPS

72.4

0.56

73.5

32.5

Major PPT

66.9

0.38

57.4

43.3

Minor 5ss

33.3

-1.9

3.2

40.5

Minor BPS

57.9

0.33

1.9

75.75

46.8

Associated Gene:

Gene:

ABCA3

Ensembl Gene ID:

ENSAPLG00000002878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025452

12540852 - 12567629

26778

ENSAPLT00000003006

12539476 - 12564912

25437