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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12560874_12561104_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12560874 - 12561104

Intron Length:

231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GGTCCTCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

AGCCTGTTGATC

Flanking Amino Acid:

FLAVTIMSIPELGLVDLSRT

Intron Amino Acid Position:

1385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

67.2

38.1

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

77.5

0.62

0.9

73.3

37.1

Minor 5ss

26.2

-2.7

3.2

34.3

Minor BPS

-0.4

1.9

49.06

35.1

Associated Gene:

Gene:

ABCA3

Ensembl Gene ID:

ENSAPLG00000002878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025452

12540852 - 12567629

26778

ENSAPLT00000003006

12539476 - 12564912

25437