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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12561264_12562061_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12561264 - 12562061

Intron Length:

798

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTCTC

5'SS Class:

major

3'SS Sequence:

CAACCCTGCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTGAT

U12 Branch Point Sequence:

TTTGTTCCAACC

Flanking Amino Acid:

VEAIFICKAFNISYQMNYFS

Intron Amino Acid Position:

1438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

66.3

39.5

Major BPS

70.8

0.52

1.2

63.4

44.3

Major PPT

60.9

0.25

57.5

37.9

Minor 5ss

35.5

-1.6

3.1

50.3

40.1

Minor BPS

48.4

-0.1

1.9

66.52

39.4

Associated Gene:

Gene:

ABCA3

Ensembl Gene ID:

ENSAPLG00000002878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025452

12540852 - 12567629

26778

ENSAPLT00000003006

12539476 - 12564912

25437