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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12562235_12562676_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12562235 - 12562676

Intron Length:

442

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCTGA

5'SS Class:

major

3'SS Sequence:

TCCCTGCATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTGCAT

U12 Branch Point Sequence:

TGTCCCTGCATT

Flanking Amino Acid:

VCGICRRRKWVALLNRVSVL

Intron Amino Acid Position:

1496

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

41.3

Major BPS

50.1

1.4

43.2

Major PPT

72.3

0.5

0.9

69.2

Minor 5ss

37.3

-1.4

38.1

46.8

Minor BPS

53.2

0.18

1.9

75.4

41.1

Associated Gene:

Gene:

ABCA3

Ensembl Gene ID:

ENSAPLG00000002878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003006

12539476 - 12564912

25437

ENSAPLT00000025452

12540852 - 12567629

26778