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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12562812_12562958_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12562812 - 12562958

Intron Length:

147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTGCAC

U12 Branch Point Sequence:

GTGTCCTGCACG

Flanking Amino Acid:

SPLVIKELTKVYDSRESLLA

Intron Amino Acid Position:

1541

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

74.8

Major BPS

46.1

-0.2

1.4

54.6

40.8

Major PPT

74.2

0.54

0.8

65.7

36.1

Minor 5ss

26.2

-2.7

2.9

30.9

42.7

Minor BPS

51.6

-0

61.1

46.2

Associated Gene:

Gene:

ABCA3

Ensembl Gene ID:

ENSAPLG00000002878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025452

12540852 - 12567629

26778

ENSAPLT00000003006

12539476 - 12564912

25437