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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12563154_12563756_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12563154 - 12563756

Intron Length:

603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCGAGG

5'SS Class:

major

3'SS Sequence:

CTCCCCCCTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

TCCCCCCTAAAG

Flanking Amino Acid:

GHSILANIKKVQQRIGYCPQ

Intron Amino Acid Position:

1606

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.2

0.36

1.3

55.4

48.8

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

64.3

0.32

63.2

25.4

Minor 5ss

36.1

-1.6

3.3

48.9

46.9

Minor BPS

48.9

-0.2

1.9

54.92

45.6

Associated Gene:

Gene:

ABCA3

Ensembl Gene ID:

ENSAPLG00000002878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025452

12540852 - 12567629

26778

ENSAPLT00000003006

12539476 - 12564912

25437