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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12564700_12565250_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12564700 - 12565250

Intron Length:

551

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

CTGTCCCGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTGAC

U12 Branch Point Sequence:

CTGGCAGTGACT

Flanking Amino Acid:

LTNKNLSWAQVFGALEKAKE

Intron Amino Acid Position:

1666

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

67.8

43.5

Major BPS

51.2

0.03

1.2

44.4

38.7

Major PPT

71.5

0.48

65.6

Minor 5ss

28.6

-2.5

3.5

37.8

47.1

Minor BPS

44.1

-0.3

2.3

63.62

46.9

Associated Gene:

Gene:

ABCA3

Ensembl Gene ID:

ENSAPLG00000002878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025452

12540852 - 12567629

26778