Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_12568933_12569008_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12568933 - 12569008

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGGGGG

5'SS Class:

major

3'SS Sequence:

CCTCTGTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

CGGGCCTCACCC

Flanking Amino Acid:

HEENVRFVYEAWQEVEQQLD

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

44.1

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

73.3

0.52

0.8

64.5

36.5

Minor 5ss

22.1

-3.2

3.4

28.8

43.7

Minor BPS

45.2

-0.3

1.9

50.79

Associated Gene:

Gene:

MCRIP2

Ensembl Gene ID:

ENSAPLG00000003848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003929

12568473 - 12572508

4036