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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12589757_12591116_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12589757 - 12591116

Intron Length:

1360

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCCACCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

TGGGCCTTGACT

Flanking Amino Acid:

GMEKIWRPNRVFSLQDLCCR

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

78.1

0.63

0.8

71.5

34.3

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

70.6

0.73

1.4

79.87

42.4

Associated Gene:

Gene:

RAB40C

Ensembl Gene ID:

ENSAPLG00000004049

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004146

12589476 - 12603450

13975