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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12591340_12591824_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12591340 - 12591824

Intron Length:

485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCCAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

CTTTCTTTATTT

Flanking Amino Acid:

IDRWIKEIDEHAPGVPRILV

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.9

74.1

38.3

Major BPS

83.9

0.84

73.9

41.3

Major PPT

95.9

1.03

0.5

95.6

15.1

Minor 5ss

37.2

-1.4

48.3

Minor BPS

69.3

0.68

1.6

83.14

Associated Gene:

Gene:

RAB40C

Ensembl Gene ID:

ENSAPLG00000004049

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004146

12589476 - 12603450

13975