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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12657935_12663567_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12657935 - 12663567

Intron Length:

5633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAGAA

U12 Branch Point Sequence:

AGAAGCAAAAGA

Flanking Amino Acid:

LSLISGACKSRMLKFWPLSF

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

73.2

37.5

Major BPS

46.7

-0.2

0.9

39.1

Major PPT

82.9

0.74

0.9

77.3

Minor 5ss

31.6

-2.1

3.4

43.4

44.3

Minor BPS

34.8

-1.1

2.2

41.1

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004646

12656116 - 12664241

8126