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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12695159_12713857_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12695159 - 12713857

Intron Length:

18699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

AAACCCTCACCC

Flanking Amino Acid:

QHQHLHHRVRSNSHSPGSMA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

81.7

0.71

0.8

37.3

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

48.2

-0.1

1.8

57.31

40.5

Associated Gene:

Gene:

CAPN15

Ensembl Gene ID:

ENSAPLG00000003550

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003626

12686416 - 12723737

37322

ENSAPLT00000003628

12686416 - 12723320

36905