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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1273274_1277895_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

1273274 - 1277895

Intron Length:

4622

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTTTCTATT

5'SS Class:

weak_minor

3'SS Sequence:

TAGCTTATTGAAG|G

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

AGCTTAT

U12 Branch Point Sequence:

TTTAGCTTATTG

Flanking Amino Acid:

DKKRHLGNDFAVLSTRVPAH

Intron Amino Acid Position:

1530

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

48.5

-0

1.3

61.2

42.7

Major BPS

67.4

0.43

1.1

57.4

41.4

Major PPT

64.8

0.33

1.1

64.9

Minor 5ss

57.9

0.27

2.1

75.9

32.8

Minor BPS

50.1

-0.1

2.1

63.8

44.5

Associated Gene:

Gene:

TSC2

Ensembl Gene ID:

ENSAPLG00000007194

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029382

1273205 - 1311261

38057