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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12748597_12749156_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12748597 - 12749156

Intron Length:

560

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTATCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TATTTGTCAATT

Flanking Amino Acid:

DFSVLLKALEDYEQYINEGI

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

84.4

33.5

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

88.1

0.86

0.8

80.9

36.4

Minor 5ss

-1.5

3.1

51.8

44.8

Minor BPS

52.5

0.16

2.2

76.85

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004058

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027540

12745253 - 12754365

9113

ENSAPLT00000004152

12745253 - 12754365

9113