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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12756617_12758301_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12756617 - 12758301

Intron Length:

1685

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCTTTTTTT

5'SS Class:

weak_major

3'SS Sequence:

TATTTGAAAGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

GCTATTTGAAAG

Flanking Amino Acid:

HVLQGIVTQSALEKWPSEHE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.9

0.02

1.4

58.1

41.1

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

47.3

-0.1

1.8

53.2

44.7

Minor 5ss

38.5

-1.3

3.9

56.1

42.6

Minor BPS

45.8

-0.4

1.6

46.5

40.1

Associated Gene:

Gene:

C16orf89

Ensembl Gene ID:

ENSAPLG00000004102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004201

12752498 - 12762061

9564