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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12758437_12758874_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12758437 - 12758874

Intron Length:

438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAATA

5'SS Class:

strong_major

3'SS Sequence:

GATTTGATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TCTTCTTTGATT

Flanking Amino Acid:

LEQNDPKYFKEFAPILGPHF

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

83.2

28.3

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

75.1

0.56

70.6

44.1

Minor 5ss

36.4

-1.5

3.1

48.8

46.9

Minor BPS

77.5

0.95

86.34

34.1

Associated Gene:

Gene:

C16orf89

Ensembl Gene ID:

ENSAPLG00000004102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018562

12756427 - 12762308

5882

ENSAPLT00000004201

12752498 - 12762061

9564