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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12760894_12761320_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12760894 - 12761320

Intron Length:

427

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTACGTAAT

5'SS Class:

major

3'SS Sequence:

TAATTTCCCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TGCCATTTAATT

Flanking Amino Acid:

SSSRDLFMENIMLCGMSGFS

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.1

72.2

39.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

70.7

0.47

0.9

63.3

38.9

Minor 5ss

38.5

-1.3

3.1

56.2

42.2

Minor BPS

58.4

0.34

1.5

70.98

40.2

Associated Gene:

Gene:

C16orf89

Ensembl Gene ID:

ENSAPLG00000004102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004201

12752498 - 12762061

9564

ENSAPLT00000023891

12756427 - 12762061

5635

ENSAPLT00000018562

12756427 - 12762308

5882