Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_12767323_12767746_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12767323 - 12767746

Intron Length:

424

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGATGT

5'SS Class:

major

3'SS Sequence:

CTTTTCATTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

GCTCTTTTCATT

Flanking Amino Acid:

LVCREGESIQGSHVTRWPGF

Intron Amino Acid Position:

617

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.3

72.5

39.9

Major BPS

100

1.24

0.5

100

Major PPT

0.81

0.8

77.9

35.1

Minor 5ss

35.1

-1.7

3.1

48.5

Minor BPS

49.1

0.01

1.7

64.87

40.6

Associated Gene:

Gene:

SEC14L5

Ensembl Gene ID:

ENSAPLG00000004578

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004738

12765309 - 12800780

35472