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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12819915_12820899_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12819915 - 12820899

Intron Length:

985

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCTCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCAAAA

U12 Branch Point Sequence:

CTCCCTGCAAAA

Flanking Amino Acid:

TDSQGTVAYGDLLQALRDVM

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.8

43.8

Major BPS

52.9

0.07

1.1

59.3

35.9

Major PPT

84.1

0.77

0.7

79.9

25.5

Minor 5ss

33.3

-1.9

2.8

39.7

45.9

Minor BPS

40.9

-0.6

2.1

49.74

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004922

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019032

12813111 - 12851318

38208

ENSAPLT00000017203

12813111 - 12852338

39228

ENSAPLT00000005084

12813111 - 12843997

30887