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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12827654_12827846_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12827654 - 12827846

Intron Length:

193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

AGTGCTCTGACT

Flanking Amino Acid:

ELMPDGDCYKDGRLRPGDQL

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.8

77.9

38.6

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

76.6

0.6

0.8

76.2

32.4

Minor 5ss

33.6

-1.9

2.9

40.4

45.7

Minor BPS

51.3

0.12

1.8

70.79

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004922

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019032

12813111 - 12851318

38208

ENSAPLT00000017203

12813111 - 12852338

39228

ENSAPLT00000005084

12813111 - 12843997

30887