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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12827989_12830329_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12827989 - 12830329

Intron Length:

2341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTACGTACA

5'SS Class:

major

3'SS Sequence:

CTCTCCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

GTCACCTCGAGT

Flanking Amino Acid:

IGNPAHTPHTHYSTESGIQS

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.1

65.9

39.8

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

82.6

0.73

0.7

76.6

25.4

Minor 5ss

37.1

-1.5

2.9

48.7

41.1

Minor BPS

47.8

-0

1.9

65.1

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004922

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019032

12813111 - 12851318

38208

ENSAPLT00000017203

12813111 - 12852338

39228

ENSAPLT00000005084

12813111 - 12843997

30887