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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12838981_12842501_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12838981 - 12842501

Intron Length:

3521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGCCAC

U12 Branch Point Sequence:

CTTTGTGCCACG

Flanking Amino Acid:

FDFYDCANGLGIKVIGGIKE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

71.4

40.3

Major BPS

43.9

-0.3

1.4

49.9

45.3

Major PPT

77.5

0.62

0.7

69.3

31.3

Minor 5ss

-2.2

2.9

34.5

Minor BPS

35.5

-1.2

2.6

46.32

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004922

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019032

12813111 - 12851318

38208

ENSAPLT00000017203

12813111 - 12852338

39228

ENSAPLT00000005084

12813111 - 12843997

30887