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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12842576_12851029_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

12842576 - 12851029

Intron Length:

8454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCACT

5'SS Class:

major

3'SS Sequence:

CTCTCTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

AATTCAGGAAGA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.3

75.3

40.8

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

77.1

0.61

0.7

69.1

31.5

Minor 5ss

37.4

-1.4

2.8

50.5

45.5

Minor BPS

41.6

-0.6

2.4

57.31

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004922

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019032

12813111 - 12851318

38208